Python Module Index

p
 
p
pat2vec
    pat2vec.main_pat2vec
    pat2vec.pat2vec_get_methods
    pat2vec.pat2vec_get_methods.get_method_appointments
    pat2vec.pat2vec_get_methods.get_method_bed
    pat2vec.pat2vec_get_methods.get_method_bloods
    pat2vec.pat2vec_get_methods.get_method_bmi
    pat2vec.pat2vec_get_methods.get_method_core02
    pat2vec.pat2vec_get_methods.get_method_core_resus
    pat2vec.pat2vec_get_methods.get_method_current_pat_annotations_mrc_cs
    pat2vec.pat2vec_get_methods.get_method_demo
    pat2vec.pat2vec_get_methods.get_method_demographics
    pat2vec.pat2vec_get_methods.get_method_diagnostics
    pat2vec.pat2vec_get_methods.get_method_drugs
    pat2vec.pat2vec_get_methods.get_method_hosp_site
    pat2vec.pat2vec_get_methods.get_method_news
    pat2vec.pat2vec_get_methods.get_method_pat_annotations
    pat2vec.pat2vec_get_methods.get_method_report_annotations
    pat2vec.pat2vec_get_methods.get_method_smoking
    pat2vec.pat2vec_get_methods.get_method_textual_obs_annotations
    pat2vec.pat2vec_get_methods.get_method_vte_status
    pat2vec.pat2vec_main_methods
    pat2vec.pat2vec_main_methods.main_batch
    pat2vec.pat2vec_pat_list
    pat2vec.pat2vec_pat_list.get_patient_treatment_list
    pat2vec.pat2vec_search
    pat2vec.pat2vec_search.cogstack_search_methods
    pat2vec.pat2vec_search.data_helper_functions
    pat2vec.pat2vec_search.matcher
    pat2vec.pat2vec_search.nearest
    pat2vec.pat2vec_search.search_helper_functions
    pat2vec.pat2vec_search.search_multiprocess
    pat2vec.patvec_get_batch_methods
    pat2vec.patvec_get_batch_methods.get_merged_batches
    pat2vec.patvec_get_batch_methods.get_prefetch_batches
    pat2vec.patvec_get_batch_methods.main
    pat2vec.util
    pat2vec.util.anonymisation_data_methods
    pat2vec.util.anonymisation_deid_documents
    pat2vec.util.calculate_interval
    pat2vec.util.clinical_note_splitter
    pat2vec.util.compile_requirements
    pat2vec.util.config_pat2vec
    pat2vec.util.credentials
    pat2vec.util.current_pat_batch_path_methods
    pat2vec.util.dummy_data_files
    pat2vec.util.dummy_data_files.dummy_lists
    pat2vec.util.elasticsearch_methods
    pat2vec.util.ethnicity_abstractor
    pat2vec.util.evaluation_methods
    pat2vec.util.evaluation_methods_ploting
    pat2vec.util.filter_dataframe_by_timestamp
    pat2vec.util.filter_methods
    pat2vec.util.generate_date_list
    pat2vec.util.get_best_gpu
    pat2vec.util.get_dummy_data_cohort_searcher
    pat2vec.util.get_dummy_data_medcat_annotation
    pat2vec.util.get_start_end_year_month
    pat2vec.util.helper_functions
    pat2vec.util.impute_data_for_pipe
    pat2vec.util.logger_setup
    pat2vec.util.medcat_misc_methods
    pat2vec.util.methods_annotation
    pat2vec.util.methods_annotation_filter_annot_dataframe
    pat2vec.util.methods_annotation_get_pat_document_annotation_batch
    pat2vec.util.methods_annotation_json_to_dataframe
    pat2vec.util.methods_annotation_multi_annots_to_df
    pat2vec.util.methods_annotation_regex
    pat2vec.util.methods_get
    pat2vec.util.methods_get_medcat
    pat2vec.util.methods_post_get
    pat2vec.util.parse_date
    pat2vec.util.post_processing
    pat2vec.util.post_processing_build_ipw_dataframe
    pat2vec.util.post_processing_build_methods
    pat2vec.util.post_processing_get_pat_ipw_record
    pat2vec.util.post_processing_medcat
    pat2vec.util.post_processing_process_csv_files
    pat2vec.util.pre_get_drug_treatment_docs
    pat2vec.util.pre_processing
    pat2vec.util.presentation_methods
    pat2vec.util.testing_helpers