pat2vec
Getting Started
Welcome to the pat2vec Wiki!
Installation and Setup Guide
Comprehensive Configuration Guide for pat2vec
Usage
Guides & Examples
Blood Test Data Search
Project Information
📊 Diagrams
Frequently Asked Questions (FAQ)
Contributing to pat2vec
API Reference
API Reference
Main Pipeline
pat2vec.main_pat2vec
pat2vec.pat2vec_get_methods
pat2vec.pat2vec_main_methods
pat2vec.pat2vec_pat_list
pat2vec.pat2vec_search
pat2vec.patvec_get_batch_methods
pat2vec.util
pat2vec.util.anonymisation_data_methods
pat2vec.util.anonymisation_deid_documents
pat2vec.util.calculate_interval
pat2vec.util.clinical_note_splitter
pat2vec.util.compile_requirements
pat2vec.util.config_pat2vec
pat2vec.util.credentials
pat2vec.util.current_pat_batch_path_methods
pat2vec.util.dummy_data_files
pat2vec.util.elasticsearch_methods
pat2vec.util.ethnicity_abstractor
pat2vec.util.evaluation_methods
pat2vec.util.evaluation_methods_ploting
pat2vec.util.filter_dataframe_by_timestamp
pat2vec.util.filter_methods
pat2vec.util.generate_date_list
pat2vec.util.get_best_gpu
pat2vec.util.get_dummy_data_cohort_searcher
pat2vec.util.get_dummy_data_medcat_annotation
pat2vec.util.get_start_end_year_month
pat2vec.util.helper_functions
pat2vec.util.impute_data_for_pipe
pat2vec.util.logger_setup
pat2vec.util.medcat_misc_methods
pat2vec.util.methods_annotation
pat2vec.util.methods_annotation_filter_annot_dataframe
pat2vec.util.methods_annotation_get_pat_document_annotation_batch
pat2vec.util.methods_annotation_json_to_dataframe
pat2vec.util.methods_annotation_multi_annots_to_df
pat2vec.util.methods_annotation_regex
pat2vec.util.methods_get
pat2vec.util.methods_get_medcat
pat2vec.util.methods_post_get
pat2vec.util.parse_date
pat2vec.util.post_processing
pat2vec.util.post_processing_build_ipw_dataframe
pat2vec.util.post_processing_build_methods
pat2vec.util.post_processing_get_pat_ipw_record
pat2vec.util.post_processing_medcat
pat2vec.util.post_processing_process_csv_files
pat2vec.util.pre_get_drug_treatment_docs
pat2vec.util.pre_processing
pat2vec.util.presentation_methods
pat2vec.util.testing_helpers
pat2vec.main_pat2vec.main
pat2vec
API Reference
pat2vec.util
pat2vec.util.credentials
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pat2vec.util.credentials